Test environment running 7.6.6

Cultural advice

The Australian National University acknowledges, celebrates and pays our respects to the Ngunnawal and Ngambri people of the Canberra region and to all First Nations Australians on whose traditional lands we meet and work, and whose cultures are among the oldest continuing cultures in human history.

Aboriginal and Torres Strait Islander peoples are advised that ANU Library collections may include images, names, voices, and other representations of deceased persons.

Material in the collection may contain terms, language or views that reflect the period in which the item was created and may be considered inappropriate today.

Draft Genome Resource for Macrophomina phaseolina Associated with Charcoal Rot in Sorghum

Thumbnail Image

Date

2020

Authors

Journal Title

Journal ISSN

Volume Title

Publisher

Abstract

Macrophomina phaseolina is a soil-borne phytopathogenic fungus that causes charcoal rot in several plant species, including sorghum. We constructed a draft genome of M. phaseolina isolate BRIP 70780a from sorghum, using long-read native DNA from MinION sequencing, which was error-corrected using short-read Illumina MiSeq reads. The draft genome, consisting of 22 contigs with an N50 of 4,257,441 bp, 99.3% complete benchmarking universal single-copy orthologs, and 14,471 genes, is a valuable resource to aid future studies in population genomics and molecular diagnostic marker development for rapid detection of the pathogen.

Description

Keywords

Charcoal rot, Macrophomina phaseolina, MinION, Oxford Nanopore, Sorghum

Citation

URI

https://dspace-test.anu.edu.au/handle/1885/733713354

Collections

DevOps Pure Testing

Source

Molecular Plant-Microbe Interactions

Type

Article

Book Title

Entity type

Access Statement

License Rights

DOI

10.1094/MPMI-12-19-0356-A

Restricted until

DSpace software copyright © 2002-2026 LYRASIS